TY - JOUR
T1 - Role of the jelly-roll fold in substrate binding by 2-oxoglutarate oxygenases
AU - Aik, Wei Shen
AU - McDonough, Michael A
AU - Thalhammer, Armin
AU - Chowdhury, Rasheduzzaman
AU - Schofield, Christopher J
N1 - Funding Information:
We thank the Biotechnology and Biological Sciences Research Council, the Wellcome Trust, the British Heart Foundation, and the European Research Council for funding our work on oxygenases. We thank our colleagues for their contribution to our work, especially those working on crystallographic analyses, and apologize for incomplete citations owing to space constraints.
Publisher copyright:
© 2012 Elsevier Ltd.
PY - 2012/12
Y1 - 2012/12
N2 - 2-Oxoglutarate (2OG) and ferrous iron dependent oxygenases catalyze two-electron oxidations of a range of small and large molecule substrates, including proteins/peptides/amino acids, nucleic acids/bases, and lipids, as well as natural products including antibiotics and signaling molecules. 2OG oxygenases employ variations of a core double-stranded β-helix (DSBH; a.k.a. jelly-roll, cupin or jumonji C (JmjC)) fold to enable binding of Fe(II) and 2OG in a subfamily conserved manner. The topology of the DSBH limits regions directly involved in substrate binding: commonly the first, second and eighth strands, loops between the second/third and fourth/fifth DSBH strands, and the N-terminal and C-terminal regions are involved in primary substrate, co-substrate and cofactor binding. Insights into substrate recognition by 2OG oxygenases will help to enable selective inhibition and bioengineering studies.
AB - 2-Oxoglutarate (2OG) and ferrous iron dependent oxygenases catalyze two-electron oxidations of a range of small and large molecule substrates, including proteins/peptides/amino acids, nucleic acids/bases, and lipids, as well as natural products including antibiotics and signaling molecules. 2OG oxygenases employ variations of a core double-stranded β-helix (DSBH; a.k.a. jelly-roll, cupin or jumonji C (JmjC)) fold to enable binding of Fe(II) and 2OG in a subfamily conserved manner. The topology of the DSBH limits regions directly involved in substrate binding: commonly the first, second and eighth strands, loops between the second/third and fourth/fifth DSBH strands, and the N-terminal and C-terminal regions are involved in primary substrate, co-substrate and cofactor binding. Insights into substrate recognition by 2OG oxygenases will help to enable selective inhibition and bioengineering studies.
UR - http://www.scopus.com/inward/record.url?scp=84870393134&partnerID=8YFLogxK
U2 - 10.1016/j.sbi.2012.10.001
DO - 10.1016/j.sbi.2012.10.001
M3 - Review article
C2 - 23142576
AN - SCOPUS:84870393134
SN - 0959-440X
VL - 22
SP - 691
EP - 700
JO - Current Opinion in Structural Biology
JF - Current Opinion in Structural Biology
IS - 6
ER -