TY - JOUR
T1 - Expert-level diagnosis of pediatric posterior fossa tumors via consistency calibration
AU - Sun, Chenghao
AU - Yan, Zihan
AU - Zhang, Yonggang
AU - Tian, Xinmei
AU - Gong, Jian
N1 - Publisher Copyright:
© 2024 Elsevier B.V. All rights are reserved, including those for text and data mining, AI training, and similar technologies.
Funding Information:
This study was funded by the National Natural Science Foundation of China (Grant No. 62222117 and No. 62276027). We want to express our gratitude to the following organizations and individuals for their contributions to data collection: China Pediatric Neurosurgery Federation (CPNF), National Center for Neurological Disorders; Yunwei OU, Yongji TIAN, Wei LIU, Chunde Li, Zhenyu MA, Beijing Tiantan Hospital, Capital Medical University; Qing CHANG, Dept. of Neuropathology, Beijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University; Rong ZHANG, Huashan Hospital, Fudan University; Junping ZHANG, SanboBrain Hospital, Capital Medical University; Guangyu WANG, Qilu Shandong University; Jie ZHAO, Xiangya Children’s Hospital of Hospital, Central South University; Jie GONG, Qilu Hospital of Shandong University and Institute of Brain and Brain-Inspired Science; Ping LIANG, Children’s Hospital of Chongqing Medical University; Xiaosheng HE, Xijing Hospital; Chen JIANG, The First Affiliated Hospital of USTC; Erkun GUO, The Second Hospital of HeBei Medical University; Zhipeng SHEN, The Children’s Hospital Zhejiang University School of Medicine.
PY - 2024/7/19
Y1 - 2024/7/19
N2 - Accurate diagnosis of pediatric posterior fossa tumors (PFTs) is critical for saving lives; however, the limited number of specialists makes accurate diagnostics scarce. To make the diagnosis of PFTs accurate, automatic, and noninvasive, scholars have proposed employing deep neural networks (DNNs) to predict tumor types using magnetic resonance imaging data. Advanced methods primarily focus on fine-tuning DNNs pre-trained on large-scale datasets of natural images, e.g., ImageNet. However, the existing methods overlook the priors of human experts. Human experts typically recheck whether images predicted as a particular class are similar to those predicted as the same class to ensure prediction consistency. Therefore, the predicted results of an intelligent system should be consistent. Inspired by the rechecking process, we propose a novel learning paradigm called Consistency calibration (Coca). Within the Coca framework, the output predicted by DNNs is guided by two objective functions: (i) the task-specific objective of making the predicted results the same as the groundtruth, and (ii) an auxiliary objective of rechecking the prediction consistency. Coca is developed by defining the inconsistency for each sample by inconsistent risks: the auxiliary risk is small (large), but the task-specific risk is large (small). Building on the inconsistency definition, Coca identifies inconsistencies for each sample using an adversarial attack. Subsequently, these inconsistencies are leveraged to tune DNNs in an adversarial training manner for consistency calibration. To verify the efficacy of Coca, we conduct comprehensive experiments using a large-scale PBT dataset, and the results show that Coca significantly outperforms state-of-the-art methods. Moreover, Coca has improved performance over human experts as demonstrated by expert-level diagnostic performance in real-world PBT scenarios for the first time.
AB - Accurate diagnosis of pediatric posterior fossa tumors (PFTs) is critical for saving lives; however, the limited number of specialists makes accurate diagnostics scarce. To make the diagnosis of PFTs accurate, automatic, and noninvasive, scholars have proposed employing deep neural networks (DNNs) to predict tumor types using magnetic resonance imaging data. Advanced methods primarily focus on fine-tuning DNNs pre-trained on large-scale datasets of natural images, e.g., ImageNet. However, the existing methods overlook the priors of human experts. Human experts typically recheck whether images predicted as a particular class are similar to those predicted as the same class to ensure prediction consistency. Therefore, the predicted results of an intelligent system should be consistent. Inspired by the rechecking process, we propose a novel learning paradigm called Consistency calibration (Coca). Within the Coca framework, the output predicted by DNNs is guided by two objective functions: (i) the task-specific objective of making the predicted results the same as the groundtruth, and (ii) an auxiliary objective of rechecking the prediction consistency. Coca is developed by defining the inconsistency for each sample by inconsistent risks: the auxiliary risk is small (large), but the task-specific risk is large (small). Building on the inconsistency definition, Coca identifies inconsistencies for each sample using an adversarial attack. Subsequently, these inconsistencies are leveraged to tune DNNs in an adversarial training manner for consistency calibration. To verify the efficacy of Coca, we conduct comprehensive experiments using a large-scale PBT dataset, and the results show that Coca significantly outperforms state-of-the-art methods. Moreover, Coca has improved performance over human experts as demonstrated by expert-level diagnostic performance in real-world PBT scenarios for the first time.
KW - Pediatric posterior fossa tumors
KW - Deep neural networks
KW - Consistency calibration
UR - http://www.scopus.com/inward/record.url?scp=85193431871&partnerID=8YFLogxK
U2 - 10.1016/j.knosys.2024.111919
DO - 10.1016/j.knosys.2024.111919
M3 - Journal article
AN - SCOPUS:85193431871
SN - 0950-7051
VL - 296
JO - Knowledge-Based Systems
JF - Knowledge-Based Systems
M1 - 111919
ER -