Discovery of ASGR1 and HMGCR dual-target inhibitors based on supervised learning, molecular docking, molecular dynamics simulations, and biological evaluation

Yanfeng Liu, Liangying Deng, Feng Ding, Wenhui Zhang, Shuran Zhang, Bailin Zeng, Huangjin Tong*, Lixing Wu*

*Corresponding author for this work

Research output: Contribution to journalJournal articlepeer-review

Abstract

3-Hydroxy-3-Methylglutaryl-CoA Reductase (HMGCR) and Asialoglycoprotein Receptor 1 (ASGR1) are potential therapeutic targets for atherosclerotic cardiovascular disease (ASCVD). In this study, we employed an innovative approach that combined ligand-based supervised learning, molecular docking, molecular dynamics simulations, and various in-silico techniques. The objective was to effectively screen the Chemdiv and SPECS molecule databases to discover potential inhibitors targeting both HMGCR and ASGR1, resulting in a dual inhibition effect. Compound 8006–6092, K007–0721, and D011–1471 exhibited inhibition rates of 41.48 %, 61.48 %, and 49.63 %, respectively, at a concentration of 10 μM against HMGCR. In addition, they demonstrated significant binding to ASGR1, with dissociation constants (Kd) of 461.33 μM, 67.63 μM, and 695.50 μM, respectively. These findings suggest that these dual inhibitors, 8006–6092, K007–0721, and D011–1471, present promising outcomes, potentially warranting further optimization as lead compounds for the treatment of ASCVD.

Original languageEnglish
Article number108326
Number of pages11
JournalBioorganic Chemistry
Volume158
DOIs
Publication statusPublished - May 2025

User-Defined Keywords

  • 3-hydroxy-3-methylglutaryl-CoA reductase (HMGCR)
  • Asialoglycoprotein receptor 1 (ASGR1)
  • Dual-target inhibitors
  • Molecular docking
  • Molecular dynamics simulation

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