cRedAnno+: Annotation Exploitation In Self-Explanatory Lung Nodule Diagnosis

Jiahao Lu, Chong Yin, Kenny Erleben, Michael Bachmann Nielsen, Sune Darkner

Research output: Chapter in book/report/conference proceedingConference proceedingpeer-review

Abstract

Recently, attempts have been made to reduce annotation requirements in feature-based self-explanatory models for lung nodule diagnosis. As a representative, cRedAnno achieves competitive performance with considerably reduced annotation needs by introducing self-supervised contrastive learning to do unsupervised feature extraction. However, it exhibits unstable performance under scarce annotation conditions. To improve the accuracy and robustness of cRedAnno, we propose an annotation exploitation mechanism by conducting semi-supervised active learning with sparse seeding and training quenching in the learned semantically meaningful reasoning space, to jointly utilise the extracted features, annotations, and unlabelled data. The proposed approach achieves comparable or even higher malignancy prediction accuracy with 10x fewer annotations, meanwhile showing better robustness and nodule attribute prediction accuracy under the condition of 1% annotations. Our complete code is open-source available: https://github.com/diku-dk/credanno.

Original languageEnglish
Title of host publication2023 IEEE International Symposium on Biomedical Imaging, ISBI 2023
PublisherIEEE
Number of pages5
ISBN (Electronic)9781665473583
ISBN (Print)9781665473590
DOIs
Publication statusPublished - 18 Apr 2023
Event20th IEEE International Symposium on Biomedical Imaging: ISBI 2023 - Cartagena, Colombia
Duration: 18 Apr 202321 Apr 2023
https://ieeexplore.ieee.org/xpl/conhome/10230311/proceeding (conference proceeding)
https://biomedicalimaging.org/2023/ (conference website)

Publication series

NameProceedings - International Symposium on Biomedical Imaging
PublisherIEEE
Volume2023-April
ISSN (Print)1945-7928
ISSN (Electronic)1945-8452

Conference

Conference20th IEEE International Symposium on Biomedical Imaging
Country/TerritoryColombia
CityCartagena
Period18/04/2321/04/23
Internet address

User-Defined Keywords

  • Active learning
  • Explainable AI
  • Lung nodule diagnosis
  • Self-explanatory model
  • Semi-supervised learning

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