Projects per year
Personal profile
Chinese Name
Biography
Research Interests
His primary research interests are computational genomics, bioinformatics and machine learning.
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Education/Academic qualification
Postdoctoral Fellow, Stanford University
18 Jun 2016 → 31 Jan 2019
Award Date: 31 Jan 2019
PhD student, City University of Hong Kong
1 Sept 2012 → 15 Feb 2016
Award Date: 15 Feb 2016
Mphil Student, The University of Hong Kong
1 Sept 2010 → 31 Aug 2012
Award Date: 31 Aug 2012
Undergraduate student, Tianjin University
1 Sept 2004 → 15 Jul 2008
Award Date: 15 Jul 2008
Keywords
- QA75 Electronic computers. Computer science
- Bioinformatics
- Computational Genomics
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A computational framework to prioritize disease-associated low frequency variants from Identity-By-Descent regions
1/09/19 → 28/02/23
Project: Research project
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Ruminococcus gnavus plays a pathogenic role in diarrhea-predominant irritable bowel syndrome by increasing serotonin biosynthesis
Zhai, L., Huang, C., Ning, Z., Zhang, Y., Zhuang, M., Yang, W., Wang, X., Wang, J., Zhang, L., Xiao, H., Zhao, L., Asthana, P., Lam, Y. Y., Chow, C. F. W., Huang, J. D., Yuan, S., Chan, K. M., Yuan, C. S., Lau, J. Y. N., Wong, H. L. X., & 1 others , 11 Jan 2023, In: Cell Host and Microbe. 31, 1, p. 33-44.e5 12 p.Research output: Contribution to journal › Article › peer-review
1 Citation (Scopus) -
A Bayesian factorization method to recover single-cell RNA sequencing data
Wen, Z-H., Langsam, J. L., Zhang, L., Shen, W. & Zhou, X., 24 Jan 2022, In: Cell Reports Methods. 2, 1, 18 p., 100133.Research output: Contribution to journal › Article › peer-review
Open Access -
Aquila_stLFR: diploid genome assembly based structural variant calling package for stLFR linked-reads
Liu, Y. H., Grubbs, G. L., Zhang, L., Fang, X., Dill, D. L., Sidow, A. & Zhou, X., 16 Jun 2021, In: Bioinformatics advances. 1, 1, 3 p., vbab007.Research output: Contribution to journal › Article › peer-review
Open Access -
Aquila enables reference-assisted diploid personal genome assembly and comprehensive variant detection based on linked reads
Zhou, X., Zhang, L., Weng, Z., Dill, D. L. & Sidow, A., 17 Feb 2021, In: Nature Communications. 12, 1, 12 p., 1077.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
A review of computational tools for generating metagenome-assembled genomes from metagenomic sequencing data
YANG, C., CHOWDHURY, D., ZHANG, Z., CHEUNG, W. K. W., LYU, A., BIAN, Z. & ZHANG, L., 29 Nov 2021, In: Computational and Structural Biotechnology Journal. 19, p. 6301-6314 14 p.Research output: Contribution to journal › Review article › peer-review
Open Access31 Citations (Scopus)